Issues

• Tutorial on integrating single-cell multiome data and performing cell type annotation

  welch-lab/pyliger#20 · Filter by author Wonderangela123 opened on Jan 16, 2025

• Export to Anndata (after integration)

  welch-lab/pyliger#19 · Filter by author DaminK opened on Nov 7, 2024

• Plans to add UINMF?

  welch-lab/pyliger#18 · Filter by author LArnoldt opened on Sep 29, 2024
  2

  

• plot_gene_loadings error

  welch-lab/pyliger#16 · Filter by author kanghelen opened on May 7, 2024
  9

  

• Potential enhancement for using BPP NNLS solver

  enhancement
  welch-lab/pyliger#15 · Filter by author mvfki opened on Feb 7, 2024
  

• How to improving similarity between snRNA-seq and snATAC-seq nuclei, by tuning parameters like 'k', 'lambda'?

  welch-lab/pyliger#14 · Filter by author wangmeijiao opened on Jan 18, 2024

• AttributeError: 'Liger' object has no attribute 'var_genes'

  welch-lab/pyliger#13 · Filter by author mumichae opened on Sep 6, 2023
  3

• remove umap.plot import in _umap.py

  welch-lab/pyliger#10 · Filter by author galicae opened on Mar 14, 2023

• Starting from 10X matrix file

  welch-lab/pyliger#9 · Filter by author kokp2000 opened on Mar 7, 2023
  1