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    396 repositories

    • DRC-Portals

      Public
      This repo has the code for the CFDE Workbench. The workbench serves the CFDE Information Portal and the CFDE Data Portal
      ot2od036435
      ot2od036435
      TypeScript
      •0•1•9•2•Updated Sep 15, 2026Sep 15, 2026

    • cfde-c2m2

      Public
      A collection of utilities for simplifying the C2M2 submission process.
      Python
      •1•3•3•0•Updated Sep 11, 2026Sep 11, 2026

    • drc-static

      Public
      Jupyter Notebook
      •0•0•1•1•Updated Sep 8, 2026Sep 8, 2026

    • KidsFirst-KG-UI

      Public
      Knowledge-Graph-UI (KG-UI) is an open-source web-based user interface built for KGs stored in Neo4j. The UI features Cypher queries for viewing immediate neighb…
      TypeScript
      •
      Other
      •20•0•0•0•Updated Sep 2, 2026Sep 2, 2026

    • Knowledge-Graph-UI

      Public
      Knowledge-Graph-UI (KG-UI) is an open-source web-based user interface built for KGs stored in Neo4j. The UI features Cypher queries for viewing immediate neighb…
      neo4jneo4j-databaseknowledge-graph
      neo4jneo4j-databaseknowledge-graphcytoscapenetworksuser-interfacegeneset-enrichmentcytoscapejscypher-query-languagenetworkscience
      TypeScript
      •
      Other
      •20•21•5•1•Updated Sep 2, 2026Sep 2, 2026

    • cfde-wheel

      Public
      Documentation for CFDE Navigation Wheel
      TypeScript
      •
      Other
      •2•1•0•0•Updated Aug 31, 2026Aug 31, 2026

    • ihdh_frontend

      Public
      Innovative Health Data Hub (IHDH) frontend
      JavaScript
      •0•0•6•0•Updated Aug 28, 2026Aug 28, 2026

    • datacrossways

      Public
      Launcher of data portal using the flask API and React fronted
      Python
      •
      Apache License 2.0
      •0•0•2•0•Updated Aug 27, 2026Aug 27, 2026

    • gsfm-predictions

      Public
      TypeScript
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•2•0•Updated Aug 27, 2026Aug 27, 2026

    • gsfm

      Public
      The gene set foundation model training, evaluation, and benchmark code.
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•4•0•0•Updated Aug 27, 2026Aug 27, 2026

    • datacrossways_api

      Public
      Oauth flask server
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 27, 2026Aug 27, 2026

    • rummagene

      Public
      Python
      •
      Other
      •5•13•9•1•Updated Aug 25, 2026Aug 25, 2026

    • docker-base

      Public
      Ma'ayan Lab Base Docker Images
      Dockerfile
      •0•0•0•0•Updated Aug 25, 2026Aug 25, 2026

    • ses-forwarder

      Public
      Terraform module to configure a SES forwarder
      JavaScript
      •
      Apache License 2.0
      •1•0•0•0•Updated Aug 25, 2026Aug 25, 2026

    • common

      Public
      Common java tools
      Java
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 20, 2026Aug 20, 2026

    • Enrichr-Viz-Appyter

      Public
      Appyter for enrichr canvases, scatter plots, and Manhattan plots
      Jupyter Notebook
      •2•0•3•1•Updated Aug 19, 2026Aug 19, 2026

    • HarmonizomePythonScripts

      Public
      Jupyter Notebook
      •11•30•0•1•Updated Aug 17, 2026Aug 17, 2026

    • maayan-lab-tools-skills

      Public
      Project #2 - 2026 - Ma'ayan Lab Tools SKILLS
      Jupyter Notebook
      •1•6•0•0•Updated Aug 7, 2026Aug 7, 2026

    • L2S2

      Public
      Jupyter Notebook
      •
      Apache License 2.0
      •0•2•3•0•Updated Aug 3, 2026Aug 3, 2026

    • D2H2-site

      Public
      HTML
      •
      Other
      •0•1•1•1•Updated Jul 30, 2026Jul 30, 2026

    • cfde_gene_pages

      Public
      Common Fund Gene Landing Pages as a Dashboard
      cfde
      cfde
      JavaScript
      •
      Other
      •0•1•6•1•Updated Jul 28, 2026Jul 28, 2026

    • Playbook-Workflow-Builder

      Public
      A repository for the Playbook Workflow Builder project.
      workflowdata-sciencebioinformatics
      workflowdata-sciencebioinformaticsgene-setsbiologysystems-biologygene-expressiongene-ontologyproteomicscwl
      TypeScript
      •
      Creative Commons Attribution 4.0 International
      •20•28•44•0•Updated Jul 21, 2026Jul 21, 2026

    • GeneRanger

      Public
      JavaScript
      •
      Other
      •1•3•1•0•Updated Jul 9, 2026Jul 9, 2026

    • lincs-reverse-search-dashboard

      Public
      A standalone webapp version of the LINCS L1000 Reverse Search Appyter
      JavaScript
      •
      Other
      •0•0•0•0•Updated Jul 8, 2026Jul 8, 2026

    • sigcom-lincs

      Public
      Signature Commons LINCS Repo
      HTML
      •3•7•10•0•Updated Jul 7, 2026Jul 7, 2026

    • helm-charts

      Public
      A repository for helm charts
      Go Template
      •0•0•0•0•Updated Jul 7, 2026Jul 7, 2026

    • kubernetes-auto-ingress

      Public
      Auto-generate kubernetes ingresses based on a deployment annotation.
      Python
      •
      Apache License 2.0
      •0•1•1•0•Updated Jul 7, 2026Jul 7, 2026

    • archs4r

      Public
      R package to load and query ARCHS4 data in R
      R
      •
      Apache License 2.0
      •2•9•0•0•Updated Jul 6, 2026Jul 6, 2026

    • archs4py

      Public
      Python package to load and query ARCHS4 data
      Python
      •
      Apache License 2.0
      •3•31•3•0•Updated Jul 6, 2026Jul 6, 2026

    • archs4dx

      Public
      JavaScript
      •
      Apache License 2.0
      •0•1•6•0•Updated Jul 6, 2026Jul 6, 2026
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