Cram support - #609

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zlskidmore wants to merge 7 commits into

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zlskidmore:cram_support

Commits on Mar 19, 2019

initial test of cram support
zlskidmore
committed
16fd13f
fix scatter
zlskidmore
committed
99f1ffb
fix typos
zlskidmore
committed
4060496
fixed another typo
zlskidmore
committed
0b793a4
forgot the -T prefix for samtools
zlskidmore
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c7ef29f
removed uneccessary file
zlskidmore
committed
3181f61
bumped java heap space
zlskidmore
committed
1bc747a