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Clean up #180

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Merged
DanWeinberger merged 7 commits into from
Jul 30, 2026
Merged

Clean up #180

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e4bc34b
cleaned up process files and removed data files we no longer generate
anshap32 Jul 29, 2026
60926d4
remove ghost files and update documentation
anshap32 Jul 29, 2026
16ef4ba
remove unnecessary parquets in census
anshap32 Jul 29, 2026
2e528d6
compressed narms and found more ghost files to delete
anshap32 Jul 29, 2026
c9804c6
Merge branch 'main' into clean-up
anshap32 Jul 29, 2026
5db486d
restore census raw parquets removed in cleanup
anshap32 Jul 30, 2026
424244f
Merge origin/main into clean-up
anshap32 Jul 30, 2026
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15 changes: 0 additions & 15 deletions data/_/README.md
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12 changes: 0 additions & 12 deletions data/_/ingest.R
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17 changes: 0 additions & 17 deletions data/_/measure_info.json
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20 changes: 0 additions & 20 deletions data/_/process.json
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6 changes: 0 additions & 6 deletions data/_/standard/datapackage.json
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44 changes: 36 additions & 8 deletions data/abcs/process.json
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Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,42 @@
"last_run": "2026-05-29 20:08:20",
"run_time": 7.673,
"last_status": {
"log": ["Rows: 3314 Columns: 3", "⠙ processing source abcs (./data/abcs/ingest.R)\r", "⠙ processing source abcs (./data/abcs/ingest.R)\r── Column specification ────────────────────────────────────────────────────────", "⠙ processing source abcs (./data/abcs/ingest.R)\rDelimiter: \"\\t\"", "chr (3): geography, geography_name, state", "", "⠙ processing source abcs (./data/abcs/ingest.R)\r", "", "⠙ processing source abcs (./data/abcs/ingest.R)\rℹ Use `spec()` to retrieve the full column specification for this data.", "⠙ processing source abcs (./data/abcs/ingest.R)\rℹ Specify the column types or set `show_col_types = FALSE` to quiet this message.", "⠙ processing source abcs (./data/abcs/ingest.R)\r", "", "⠙ processing source abcs (./data/abcs/ingest.R)\r── downloading resource <https://data.cdc.gov/resource/qvzb-qs6p> ──────────────", "⠙ processing source abcs (./data/abcs/ingest.R)\rℹ metadata: <https://data.cdc.gov/api/views/qvzb-qs6p>", "✔ metadata: <https://data.cdc.gov/api/views/qvzb-qs6p> [433ms]", "", "⠙ processing source abcs (./data/abcs/ingest.R)\rℹ data: <https://data.cdc.gov/api/views/qvzb-qs6p/rows.csv>", "✔ data: <https://data.cdc.gov/api/views/qvzb-qs6p/rows.csv> [2.2s]", "", "⠙ processing source abcs (./data/abcs/ingest.R)\rℹ compressing data", "✔ compressing data [265ms]", "", "⠙ processing source abcs (./data/abcs/ingest.R)\rRows: 17 Columns: 4", "⠙ processing source abcs (./data/abcs/ingest.R)\r", "⠙ processing source abcs (./data/abcs/ingest.R)\r── Column specification ────────────────────────────────────────────────────────", "⠙ processing source abcs (./data/abcs/ingest.R)\rDelimiter: \",\"", "chr (1): st", "dbl (3): over65, a50_64_with_indication, a50_64_no_indication", "", "⠙ processing source abcs (./data/abcs/ingest.R)\r", "", "⠙ processing source abcs (./data/abcs/ingest.R)\rℹ Use `spec()` to retrieve the full column specification for this data.", "⠙ processing source abcs (./data/abcs/ingest.R)\rℹ Specify the column types or set `show_col_types = FALSE` to quiet this message.", "⠙ processing source abcs (./data/abcs/ingest.R)\r"],
"log": [
"Rows: 3314 Columns: 3",
"⠙ processing source abcs (./data/abcs/ingest.R)\r",
"⠙ processing source abcs (./data/abcs/ingest.R)\r── Column specification ────────────────────────────────────────────────────────",
"⠙ processing source abcs (./data/abcs/ingest.R)\rDelimiter: \"\\t\"",
"chr (3): geography, geography_name, state",
"",
"⠙ processing source abcs (./data/abcs/ingest.R)\r",
"",
"⠙ processing source abcs (./data/abcs/ingest.R)\rℹ Use `spec()` to retrieve the full column specification for this data.",
"⠙ processing source abcs (./data/abcs/ingest.R)\rℹ Specify the column types or set `show_col_types = FALSE` to quiet this message.",
"⠙ processing source abcs (./data/abcs/ingest.R)\r",
"",
"⠙ processing source abcs (./data/abcs/ingest.R)\r── downloading resource <https://data.cdc.gov/resource/qvzb-qs6p> ──────────────",
"⠙ processing source abcs (./data/abcs/ingest.R)\rℹ metadata: <https://data.cdc.gov/api/views/qvzb-qs6p>",
"✔ metadata: <https://data.cdc.gov/api/views/qvzb-qs6p> [433ms]",
"",
"⠙ processing source abcs (./data/abcs/ingest.R)\rℹ data: <https://data.cdc.gov/api/views/qvzb-qs6p/rows.csv>",
"✔ data: <https://data.cdc.gov/api/views/qvzb-qs6p/rows.csv> [2.2s]",
"",
"⠙ processing source abcs (./data/abcs/ingest.R)\rℹ compressing data",
"✔ compressing data [265ms]",
"",
"⠙ processing source abcs (./data/abcs/ingest.R)\rRows: 17 Columns: 4",
"⠙ processing source abcs (./data/abcs/ingest.R)\r",
"⠙ processing source abcs (./data/abcs/ingest.R)\r── Column specification ────────────────────────────────────────────────────────",
"⠙ processing source abcs (./data/abcs/ingest.R)\rDelimiter: \",\"",
"chr (1): st",
"dbl (3): over65, a50_64_with_indication, a50_64_no_indication",
"",
"⠙ processing source abcs (./data/abcs/ingest.R)\r",
"",
"⠙ processing source abcs (./data/abcs/ingest.R)\rℹ Use `spec()` to retrieve the full column specification for this data.",
"⠙ processing source abcs (./data/abcs/ingest.R)\rℹ Specify the column types or set `show_col_types = FALSE` to quiet this message.",
"⠙ processing source abcs (./data/abcs/ingest.R)\r"
],
"success": true
}
}
Expand All @@ -19,15 +54,9 @@
"data/abcs/raw/abcs_census_age_stratified_pop_full.csv": {
"data": "not_compressed"
},
"data/abcs/raw/jiac058_suppl_supplementary_table_s2.csv": {
"data": "not_compressed"
},
"data/abcs/raw/ramirez_ofid_2025_ofae727.csv": {
"data": "not_compressed"
},
"data/abcs/standard/data.csv-MWMJ0G3P8D.gz": {
"measures": "missing_info: pop"
},
"data/abcs/standard/data.csv.gz": {
"measures": "missing_info: pop"
},
Expand All @@ -36,7 +65,6 @@
"raw_state": 1780000399,
"standard_state": {
"./data/abcs/measure_info.json": "8d6338c362e9d496223cab79760a861d",
"./data/abcs/standard/data.csv-MWMJ0G3P8D.gz": "78b8a12d7aaea3c489c200214226a7a7",
"./data/abcs/standard/data.csv.gz": "d981be4e20932bc07480efa99196d903",
"./data/abcs/standard/uad.csv.gz": "345f174b35f74d44ab6072bdc5d60ec3"
}
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