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@CDCgov

Centers for Disease Control and Prevention

CDC's collaborative software projects to protect America from health, safety, and security threats, both foreign and in the U.S. No PII or PHI permitted
README.md

CDCGov Organization

This is CDC's GitHub organization for collaborating on open source projects. More information on CDC's open collaboration projects is available at openCDC.

Check out our Open Source Practices and please suggest any ideas for improvement by sending a pull request.

Check out a portal of all the projects hosted in the CDCGov domain.

If you would like to create a new project, please fill out an issue on https://github.com/cdcgov/template logging in with your CDC credentials.

If you would like to join the CDCGov organization, or would like to suggest some others to join, please drop an issue into the template repo.

No PII/PHI permitted for hosting in this environment.

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  1. cdcgov.github.io cdcgov.github.io Public

    Portal site for all CDCgov projects, https://cdcgov.github.io

    HTML 27 35

  2. template template Public template

    Template repository with rules, practices, and privacy, license, records notices to help people use the CDCgov GitHub organization.

    43 50

Repositories

Showing 10 of 575 repositories
  • cfa-stf-routine-forecasting Public

    Models and infrastructure for routine forecasting of respiratory disease burden

    CDCgov/cfa-stf-routine-forecasting's past year of commit activity
    Python 18 Apache-2.0 5 25 6 Updated Oct 28, 2026
  • oamd-bio-test-data Public
    CDCgov/oamd-bio-test-data's past year of commit activity
    1 Apache-2.0 1 0 1 Updated Oct 28, 2026
  • NowcastAutoGP Public

    Combining AutoGP (Gaussian process ensembles with kernel structure discovery) with data revisions

    CDCgov/NowcastAutoGP's past year of commit activity
    Julia 5 Apache-2.0 0 7 0 Updated Oct 28, 2026
  • zoe Public

    Zoe provides both broad and highly specialized implementations for bioinformatics. In particular, we focus on common data formats and methods relevant for the sequencing of RNA viruses.

    CDCgov/zoe's past year of commit activity
    Rust 8 Apache-2.0 3 0 0 Updated Oct 28, 2026
  • dibbs-text-to-code Public
    CDCgov/dibbs-text-to-code's past year of commit activity
    Python 5 Apache-2.0 3 9 6 Updated Oct 28, 2026
  • cfa-cloudops Public
    CDCgov/cfa-cloudops's past year of commit activity
    Python 2 Apache-2.0 2 20 10 Updated Oct 28, 2026
  • nis-py-api Public

    Python API to NIS data

    CDCgov/nis-py-api's past year of commit activity
    Python 2 Apache-2.0 2 19 2 Updated Oct 28, 2026
  • covid19-forecast-hub Public

    A repository run by the Centers for Disease Control and Prevention (CDC) to collect forecasts of incident respiratory COVID-19 hospital admissions and emergency department visits.

    CDCgov/covid19-forecast-hub's past year of commit activity
    30 Apache-2.0 42 6 0 Updated Oct 28, 2026
  • PyRenew Public

    Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.

    CDCgov/PyRenew's past year of commit activity
    Python 30 Apache-2.0 11 69 13 Updated Oct 28, 2026
  • Opioid_SUD_MHI_MedCodes Public

    Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data

    CDCgov/Opioid_SUD_MHI_MedCodes's past year of commit activity
    Python 8 8 0 0 Updated Oct 28, 2026
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