diff --git a/plugin/src/main/java/org/openrewrite/gradle/isolated/DefaultProjectParser.java b/plugin/src/main/java/org/openrewrite/gradle/isolated/DefaultProjectParser.java
index 8178b2138..34d96ec78 100644
--- a/plugin/src/main/java/org/openrewrite/gradle/isolated/DefaultProjectParser.java
+++ b/plugin/src/main/java/org/openrewrite/gradle/isolated/DefaultProjectParser.java
@@ -822,6 +822,7 @@ private SourceFileStream parseGradleProjectSourceSets(Project subproject,
                         .map(File::toPath)
                         .map(Path::toAbsolutePath)
                         .map(Path::normalize)
+                        .filter(Files::exists)
                         .forEach(dependencyPaths::add);
             } catch (Exception e) {
                 logger.warn(
@@ -1321,6 +1322,7 @@ private SourceFileStream parseMultiplatformKotlinProject(Project subproject, Col
                         .map(File::toPath)
                         .map(Path::toAbsolutePath)
                         .map(Path::normalize)
+                        .filter(Files::exists)
                         .distinct()
                         .collect(toList());